BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F11LP1|AL429097
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1665 0.0
3x_Contig1803 408 e-114
>3x_Contig1805
Length = 19369
Score = 1665 bits (836), Expect = 0.0
Identities = 873/888 (98%), Gaps = 1/888 (0%)
Strand = Plus / Minus
Query: 1 gatcttatattttgctcttttagaaattatatattcagtataatgtttttttgtgtttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11727 gatcttatattttgctcttttagaaattatatattcagtataatgtttttttgtgtttat 11668
Query: 61 gaggagggcctttatgagttgttgtttccttttatacatatctctaaaaaawtaraaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 11667 gaggagggcctttatgagttgttgtttccttttatacatatctctaaaaaatttgaaaat 11608
Query: 121 aaaaawagacatctaaaatctaaaggcaatgcttaaaagtcgctcaaatactgatttgac 180
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11607 gacatttgacatctaaaatctaaaggcaatgcttaaaagtcgctcaaatactgatttgac 11548
Query: 181 aggtttatacattaccataaaaatttcataaaacgccgtacgtagcaagacgtatttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11547 aggtttatacattaccataaaaatttcataaaacgccgtacgtagcaagacgtatttaat 11488
Query: 241 acagttccgattattgccgaaatttcaacagattttaagatctggagaagtttcccggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11487 acagttccgattattgccgaaatttcaacagattttaagatctggagaagtttcccggag 11428
Query: 301 aaagaagcaatgctgtgaattccttggatattaacgatatcagacctcttcgtataaact 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11427 aaagaagcaatgctgtaaattccttggatattaacgatatcagacctcttcgtataaact 11368
Query: 361 ttaaaaagctctttaactaaatgaagtacgaaccaagagactatggccacaatacatgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11367 ttaaaaagctctttaactaaatgaagtacgaaccaagagactatggccacaatacatgta 11308
Query: 421 actgcctactcggcgagtgckcaagaacgaaataatgggatttttttggatattcaactt 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11307 actgcctactcggcgagtgctcaagaacgaaataatgggatttttttggatattcaactt 11248
Query: 481 ccatgtatacaaaaaagakccttcagatggggkattagaaatgcttagcagcgtcgggga 540
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11247 ccatgtatacaaaaaagatccttcagatggggtattagaaatgcttagcagcgtcgggga 11188
Query: 541 aaaaaaagcccaacatctttgaactcaatcactgttaatagagtcggtatgagacttact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11187 aaaaaaagcccaacatctttgaactcaatcactgttaatagagtcggtatgagacttact 11128
Query: 601 tgttactaacgggaccgttgtactccacttcattgtagtcccagtagaaagtaagttcgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11127 tgttactaacgggaccgttgtactccacttcattgtagtcccagtagaaagtaagttcgg 11068
Query: 661 tggtgttagacacctgttgaacttcgcaactggaaacatagtcaatgccattcaatctgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11067 tggtgttagacacctgttgaacttcgcaactggaaacatagtcaatgccattcaatctgt 11008
Query: 721 ttgtgatgtaatcgtcaaagtcctcgataggacaggaaaaccctggacctgaggtgcaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11007 ttgtgatgtaatcgtcaaagtcctcgataggacaggaaaaccctggacctgaggtgcaac 10948
Query: 781 ctgggaactggaataatcacatcgttgataatataacgaacataagaggcatttccacac 840
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10947 ct-ggaactggaataatcacatcgttgataatataacgaacataagaggcatttccacac 10889
Query: 841 ttcaatttttcagtgaagatacgacctcccataggcgtcagccaactt 888
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 10888 ttcaatttttcagtgaagatacgacctcccataggcgtcacccaactt 10841
>3x_Contig1803
Length = 52241
Score = 408 bits (205), Expect = e-114
Identities = 269/289 (93%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 592 agacttacttgttactaacgggaccgttgtactccacttcattgtagtcccagtagaaag 651
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 51085 agacttatttgttactaacaggaccattgtactccacttcattgtagtcccagtagaaag 51026
Query: 652 taagttcggtggtgttagacacctgttgaacttcgcaactggaaacatagtcaatgccat 711
||||||||||| |||||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct: 51025 taagttcggtgatgttagacacctgttggatttcgcaactggaaacatagtcaattccat 50966
Query: 712 tcaatctgtttgtgatgtaatcgtcaaagtcctcgataggacaggaaaaccctggacctg 771
||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 50965 tcaatctgtctgcgatgtaatcgtcaaagtcctcgataggacaggagaaccctggacctg 50906
Query: 772 aggtgcaacctgggaactggaataatcacatcgttgataatataacgaacataagaggca 831
||||||||||| ||||||||||||| |||||||| | ||| |||||||||||||||| |
Sbjct: 50905 aggtgcaacct-ggaactggaataacaacatcgttaacaatgtaacgaacataagaggaa 50847
Query: 832 tttccacacttcaatttttcagtgaagatacgacctcccataggcgtca 880
|||| ||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 50846 tttctacattttaatttttcagtgaagatacgacctcccataggcgtca 50798
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6281
Number of Sequences: 1807
Number of extensions: 6281
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)